2nd RoBioinfo Seminar

Bucharest
18-20 April, 2018
09:00

   

 

The first EMBL-EBI Bioinformatics training in Romania (18-19 April 2018, Bucharest) was received with huge enthusiasm by the Romanian community! 71% of attendees rated it as Excellent and 23% as Good. Quotes from the feedback form: „The trainers were very good.” „Every part of the workshop was great, from the organization, to the venue, the information presented and the knowledge and professionalism of the trainers.”. Worst part of workshop: ”That it ended :)”, “too short”. 100% of attendees would recommend the courses to colleagues. 90% agreed that the organisation was excellent. Any other comments? “Great job, everyone! Can’t wait to attend your courses / workshops in the future! Thank you!”

Când și unde?
Programul trainingului și al workshopului. Download program in format PDF.
-> Ziua 1 – training
-> Ziua 2 – training
-> Ziua 3 – seminar
Taxă de participare la training și workshop.
Înregistrarea s-a încheiat în 6 martie.
Posterul evenimentului.
Ce este EMBL-EBI?

Când și unde?

18-20 aprilie. Sala 304, Institutul de Biochimie al Academiei Române (IBAR), Splaiul Independenței 296, București.


N.B.: We would like to point out that there are some road/bridge works right in front of our Institute and this might create some confusion on how to reach us. Hopefully this picture will help you with that. Please take a printed copy and consider a few more minutes to find the way. We will not mind if you are here earlier. Apologies for the inconvenience and thank you.

Programul trainingului și al workshopului
Versiunea detaliată a cursurilor poată fi accesată aici.
18 aprilie: (training EMBL-EBI)
Introducere în resursele bioinformatice oferite de EMBL-EBI.
Sequence search and alignment.
TimeSubjectTrainer
9:00Registration
9:30Introduction to EMBL-EBI resources and toolsAndrew Cowley
11:00Break
11:30Sequence searching and alignmentAndrew Cowley
13:00Lunch
14:00Sequence searching and alignmentAndrew Cowley
15:30Break
16:00Sequence searching and alignmentAndrew Cowley
18:00End of day 1
19 aprilie: (training EMBL-EBI)
Training Ensembl.
TimeSubjectTrainer
8:50Registration for newcomers
9:00Ensembl genome browserBenjamin Moore
10:30Break
11:00Ensembl genome browserBenjamin Moore
12:30Lunch
13:30Ensembl genome browserBenjamin Moore
15:00Break
15:30Ensembl genome browserBenjamin Moore
17:00Wrap-up and feedbackBenjamin Moore
18:30Dinner at ‘Ceaunu’ Crăpat’, Strada Thomas Masaryk 7, București 020983
20 aprilie
Comunicări științifice
TimeSpeakerAffiliationTalk title
8:50Registration for newcomers
9:00RSBIRSBIWelcome note
9:10Andrei PetrescuIBAR, RomaniaResearch at IBAR. Assisting Experiments with Structural Bioinformatics and Molecular Modeling.
9:35Yang LiGroningen University, The NetherlandsUnderstanding immune system using integrative multi-omics approaches
10:00Vinod KumarGroningen University, The NetherlandsPopulation-based cohorts to disease-specific mechanisms: fungal sepsis as an example
10:25Coffee Break
10:55Rob terHorstRadboud University Nijmegen Medical Centre, The NetherlandsIntra-individual and inter-individual variation in immune responses
11:10Dorina PodarFaculty of Biology and Geology, Babes-Bolyai University, RomaniaConserved sequence in a metal transporter family: in search for an explanation for its position
11:25Marius MihasanAlexandru-Ioan Cuza University, RomaniaMolecular evolution and biotechnological applications of Paenarthrobacter nicotinovorans pAO1 megaplasmid
11:40Irina Armean (webtalk)EMBL-EBI, Cambridge, UKHuman DNA sequence variants: interpretation and implications for disease therapy
12:00Lunch break
13:00Darian OnchisWest University Timisoara, RomaniaDetecting protein coding regions using a customised multi-scales splines construction
13:25Marta SzachniukEuropean Centre for Bioinformatics and Genomics
Poznan University of Technology, Poland
RNA structure modeling as a bioinformatics challenge
13:50Maciej AntczakEuropean Centre for Bioinformatics and Genomics
Poznan University of Technology, Poland
How to recognize native-like RNA 3D models
14:05Alexandra MoatarUniversity of Medicine and Pharmacy Timisoara, RomaniaAge dependent expression of microRNA-19a in mouse tissues
14:20Anton KulagaIBARRNA-Seq pipelines for machine learning and comparative transcriptomics
14:35Coffee break
15:05Rob terHorstRadboud University Nijmegen Medical Centre, The NetherlandsMy experience in science communication: blogs, music festivals and more
15:15Roman SnytsarMicrosoft Genomics Research, Seattle, USAServices available in Azure that are helpful for Bioinformatics and organisational barriers to cloud adoption
15:35Bogdan TudorElta 90 Medical Reseach SRL / lluminaIllumina technologies available in Romania
15:55Short break
16:10Talks about the RSBI community
17:00Remarks and conclusions
24 aprilie, 11:30 am: Webinar
Introduction to IntAct – a Protein-Protein Interactions resource .
This webinar will cover:

  1. Introduction to protein interactions and networks
  2. Introduction to IntAct: how to search for, retrieve and utilise protein-protein interaction data
  3. Advanced searches and complex queries in IntAct
  4. Data Integration: PSICQUIC and IMEx resources
  5. Introduction to the Complex Portal – a unifying protein complex resource

The IntAct webinar webpage can be found here: https://www.ebi.ac.uk/training/events/2018/introduction-intact-protein-protein-interactions-resource
Registration link: https://attendee.gototraining.com/r/1426798145840544769
Training ID: 270-269-948
Materialele pentru webinar pot fi accesate aici.

Taxă de participare la training și workshop

Nu există. Institutul încearcă să acopere costurile meselor, și ale pauzelor de cafea. Deocamdată, cazarea va trebui acoperită de fiecare participant. Încercăm să găsim sponsorizări prin care să putem acoperi taxele de cazare – pentru mai multe detalii, urmăriți forumul.

Înregistrarea s-a încheiat la 6 martie.
Vă încurajăm să vă inregistrați pe forum, deoarece posibilitatea notificării automate atunci când există actualizări despre eveniment există doar în forum.
Ce este EMBL-EBI?

Institutul European de Bioinformatică (EMBL-EBI) este un institut de cercetare și centru de dezvoltare de resurse bioinformatice, parte a Laboratorului European de Biologie Moleculară (EMBL).

EMBL-EBI se află în Marea Britanie, în apropiere de Cambridge.

Resurse dezvoltate de EMBL-EBI:

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