The first EMBL-EBI Bioinformatics training in Romania (18-19 April 2018, Bucharest) was received with huge enthusiasm by the Romanian community! 71% of attendees rated it as Excellent and 23% as Good. Quotes from the feedback form: „The trainers were very good.” „Every part of the workshop was great, from the organization, to the venue, the information presented and the knowledge and professionalism of the trainers.”. Worst part of workshop: ”That it ended :)”, “too short”. 100% of attendees would recommend the courses to colleagues. 90% agreed that the organisation was excellent. Any other comments? “Great job, everyone! Can’t wait to attend your courses / workshops in the future! Thank you!”
Când și unde?
Programul trainingului și al workshopului. Download program in format PDF.
-> Ziua 1 – training
-> Ziua 2 – training
-> Ziua 3 – seminar
Taxă de participare la training și workshop.
Înregistrarea s-a încheiat în 6 martie.
Posterul evenimentului.
Ce este EMBL-EBI?
18-20 aprilie. Sala 304, Institutul de Biochimie al Academiei Române (IBAR), Splaiul Independenței 296, București.
N.B.: We would like to point out that there are some road/bridge works right in front of our Institute and this might create some confusion on how to reach us. Hopefully this picture will help you with that. Please take a printed copy and consider a few more minutes to find the way. We will not mind if you are here earlier. Apologies for the inconvenience and thank you.
Programul trainingului și al workshopului |
Versiunea detaliată a cursurilor poată fi accesată aici. |
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Introducere în resursele bioinformatice oferite de EMBL-EBI.
Sequence search and alignment. |
| Time |
Subject |
Trainer |
| 9:00 |
Registration |
|
| 9:30 |
Introduction to EMBL-EBI resources and tools |
Andrew Cowley |
| 11:00 |
Break |
|
| 11:30 |
Sequence searching and alignment |
Andrew Cowley |
| 13:00 |
Lunch |
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| 14:00 |
Sequence searching and alignment |
Andrew Cowley |
| 15:30 |
Break |
|
| 16:00 |
Sequence searching and alignment |
Andrew Cowley |
| 18:00 |
End of day 1 |
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Training Ensembl. |
| Time |
Subject |
Trainer |
| 8:50 |
Registration for newcomers |
|
| 9:00 |
Ensembl genome browser |
Benjamin Moore |
| 10:30 |
Break |
|
| 11:00 |
Ensembl genome browser |
Benjamin Moore |
| 12:30 |
Lunch |
|
| 13:30 |
Ensembl genome browser |
Benjamin Moore |
| 15:00 |
Break |
|
| 15:30 |
Ensembl genome browser |
Benjamin Moore |
| 17:00 |
Wrap-up and feedback |
Benjamin Moore |
| 18:30 |
Dinner at ‘Ceaunu’ Crăpat’, Strada Thomas Masaryk 7, București 020983 |
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Comunicări științifice |
| Time |
Speaker |
Affiliation |
Talk title |
| 8:50 |
Registration for newcomers |
| 9:00 |
RSBI |
RSBI |
Welcome note |
| 9:10 |
Andrei Petrescu |
IBAR, Romania |
Research at IBAR. Assisting Experiments with Structural Bioinformatics and Molecular Modeling. |
| 9:35 |
Yang Li |
Groningen University, The Netherlands |
Understanding immune system using integrative multi-omics approaches |
| 10:00 |
Vinod Kumar |
Groningen University, The Netherlands |
Population-based cohorts to disease-specific mechanisms: fungal sepsis as an example |
| 10:25 |
Coffee Break |
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| 10:55 |
Rob terHorst |
Radboud University Nijmegen Medical Centre, The Netherlands |
Intra-individual and inter-individual variation in immune responses |
| 11:10 |
Dorina Podar |
Faculty of Biology and Geology, Babes-Bolyai University, Romania |
Conserved sequence in a metal transporter family: in search for an explanation for its position |
| 11:25 |
Marius Mihasan |
Alexandru-Ioan Cuza University, Romania |
Molecular evolution and biotechnological applications of Paenarthrobacter nicotinovorans pAO1 megaplasmid |
| 11:40 |
Irina Armean (webtalk) |
EMBL-EBI, Cambridge, UK |
Human DNA sequence variants: interpretation and implications for disease therapy |
| 12:00 |
Lunch break |
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| 13:00 |
Darian Onchis |
West University Timisoara, Romania |
Detecting protein coding regions using a customised multi-scales splines construction |
| 13:25 |
Marta Szachniuk |
European Centre for Bioinformatics and Genomics
Poznan University of Technology, Poland |
RNA structure modeling as a bioinformatics challenge |
| 13:50 |
Maciej Antczak |
European Centre for Bioinformatics and Genomics
Poznan University of Technology, Poland |
How to recognize native-like RNA 3D models |
| 14:05 |
Alexandra Moatar |
University of Medicine and Pharmacy Timisoara, Romania |
Age dependent expression of microRNA-19a in mouse tissues |
| 14:20 |
Anton Kulaga |
IBAR |
RNA-Seq pipelines for machine learning and comparative transcriptomics |
| 14:35 |
Coffee break |
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| 15:05 |
Rob terHorst |
Radboud University Nijmegen Medical Centre, The Netherlands |
My experience in science communication: blogs, music festivals and more |
| 15:15 |
Roman Snytsar |
Microsoft Genomics Research, Seattle, USA |
Services available in Azure that are helpful for Bioinformatics and organisational barriers to cloud adoption |
| 15:35 |
Bogdan Tudor |
Elta 90 Medical Reseach SRL / llumina |
Illumina technologies available in Romania |
| 15:55 |
Short break |
| 16:10 |
Talks about the RSBI community |
| 17:00 |
Remarks and conclusions |
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24 aprilie, 11:30 am: Webinar
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Introduction to IntAct – a Protein-Protein Interactions resource . |
This webinar will cover:
- Introduction to protein interactions and networks
- Introduction to IntAct: how to search for, retrieve and utilise protein-protein interaction data
- Advanced searches and complex queries in IntAct
- Data Integration: PSICQUIC and IMEx resources
- Introduction to the Complex Portal – a unifying protein complex resource
The IntAct webinar webpage can be found here: https://www.ebi.ac.uk/training/events/2018/introduction-intact-protein-protein-interactions-resource
Registration link: https://attendee.gototraining.com/r/1426798145840544769
Training ID: 270-269-948
Materialele pentru webinar pot fi accesate aici. |
Taxă de participare la training și workshop
Nu există. Institutul încearcă să acopere costurile meselor, și ale pauzelor de cafea. Deocamdată, cazarea va trebui acoperită de fiecare participant. Încercăm să găsim sponsorizări prin care să putem acoperi taxele de cazare – pentru mai multe detalii, urmăriți forumul.
Înregistrarea s-a încheiat la 6 martie.
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Institutul European de Bioinformatică (EMBL-EBI) este un institut de cercetare și centru de dezvoltare de resurse bioinformatice, parte a Laboratorului European de Biologie Moleculară (EMBL).
EMBL-EBI se află în Marea Britanie, în apropiere de Cambridge.
Resurse dezvoltate de EMBL-EBI:
